Browse of TCMCG057C11596 protein

CDS

Accession Number	TCMCG057C11596
gbkey	CDS
Protein Id	XP_018475752.1
Location	complement(join(11505540..11506160,11506254..11506502,11506618..11507097,11507180..11508727,11508801..11509043,11509149..11509352,11509438..11509521,11509842..11509934,11510054..11510140,11510244..11510331,11510522..11510634,11510748..11512055,11512188..11513447,11513595..11513735))
Gene	LOC108847080
GeneID	108847080
Organism	Raphanus sativus

Protein

Length	2172aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018620250.1
Definition	PREDICTED: ATP-dependent helicase BRM isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	K
Description	ATP-dependent helicase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03021        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K11647        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04714        [VIEW IN KEGG] ko05225        [VIEW IN KEGG] map04714        [VIEW IN KEGG] map05225        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003677        [VIEW IN EMBL-EBI] GO:0003682        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006325        [VIEW IN EMBL-EBI] GO:0006338        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009653        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010199        [VIEW IN EMBL-EBI] GO:0010468        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0019219        [VIEW IN EMBL-EBI] GO:0019222        [VIEW IN EMBL-EBI] GO:0031323        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0040029        [VIEW IN EMBL-EBI] GO:0043044        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0048518        [VIEW IN EMBL-EBI] GO:0048522        [VIEW IN EMBL-EBI] GO:0048583        [VIEW IN EMBL-EBI] GO:0048584        [VIEW IN EMBL-EBI] GO:0048646        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0048859        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0051171        [VIEW IN EMBL-EBI] GO:0051252        [VIEW IN EMBL-EBI] GO:0051276        [VIEW IN EMBL-EBI] GO:0060147        [VIEW IN EMBL-EBI] GO:0060255        [VIEW IN EMBL-EBI] GO:0060964        [VIEW IN EMBL-EBI] GO:0060966        [VIEW IN EMBL-EBI] GO:0060968        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070920        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0080090        [VIEW IN EMBL-EBI] GO:0080134        [VIEW IN EMBL-EBI] GO:0080135        [VIEW IN EMBL-EBI] GO:0090691        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1900034        [VIEW IN EMBL-EBI] GO:1900036        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1903798        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCAATCTGGAGGCAGTGGTGGTGGAGGGCCCTCCCGGAATCCGGGTATGGGTCCCGGTGGTCGGACCAACTCCACGTCATCCGCTGCTTCTCCTTCTTCATCTTCTTCTTCTGTGCAACAGCAGCTTGCGTCTAGGCAGCAACAGCAACAGCAACAGCTGAGGAACAACACAGAGGGAAATGATGGCATGTTTGCGTATCATGCTGGTGGGGGACAGGGAATGATGGGAGGTGGCAGCTTTGGTTCTTCGTCTGGCTTTATGCAGCAGCCTCAGAAACCTAGGATGTTCTTTGAGTCTCCTCAACAACAACATAATTCTTCCCAAGAGGGCCAACAGAGTTTTAATCCAATGCAGCAAGCGTACATTCAGTTTGCTTTACAAGCACAGCAACAGAAAGCACAGCAGCAAGCTAGAATGGGAATGATGGGTCCATCAACTGTGGGTAAGAAGGATCAAGATGCACGGATGGGTGTGTTGAATATGCAAGATATGATGATGATGCCCACCATGCAGGCATCTCATCAGGCCCAGGCTTCTTCGTCTAAGCCACCGGGTGAACAGTTTGCTCACGGTGAAAGGAAGATGGAATCAGGTCCTCAGCAAAGGAACGAAACGAAACCTCATCCTCAGCAGGTTGGAACGGGACAGCTAATGCCTGGAAATATCAATAGGCAAATGCAGGCACCACAGGCGATGCAGGGTGTCAATAACATGGGAACCAACCAACTTGCATTCTCCCAGCAGTGGCAGGCGATGCAGGCATGGGCGCGTGAGCGTAATATTGATCTCTCTCATCCTGCCAACGCCAGCCAAATGGCGCACATCCTTCAGTCAAGAATGTCTGCCCAACAGAAAGCTATTGAAGGCAATGTGGCTTCACAGTCACCGTCTCTTCCAGTCTCTAGCCAGCCCGTTTCATCTTCAGCGGTTCCAGGCGAGAATTCACCTCGTGCCAACTCTGCTAGTGATATCTCTGGGCAGTCAGGACCAGCGAAGGCCAGACATGCAAACTCATTTGCTTCGACTTCCAGTCCCAGAACGGTGAATCCTGCTGCGAGTCCCTTCTCCCAAGGGAGAGATAATCCAATGTATCCTAGACATTTAGTTCAGTCTACAAATGGGATGCACTCAGGAAATTCCCTGCAGACGTCTGCAAATGAGGCGCATGTTCTGGATCAGAAAAAAAGTTTAGGTTCTTCTGAACATTTGCAGATGCAACAGCCTAGGCAGCCGAATGCACCGACTCCAAATCTAGCAGCTCCATCTGATACTGCCCCACTCAGTAACTCTTCCCGTCAGAGCGGACAGGGGACCCAACAAGCACAGAAGCGATCAGGATTTACTAAACAACAACTCCATGTTCTCAAAGCCCAGATACTGGCATTTAGGCGTTTGAAGAAAGGAGAAGGTTCTTTGCCTCAGGAGCTTCTTCAAGCTATTGCCCCACCACCGCTTGAACTGCAGACGCAGAGGCAAATTTCTCCTGTGAGGTTACAAGTTCAGGATAGATCTTCAGACAAAACTGTAGAAGACCAAGCAAGGTCGCTGGAGTCTGGCAGAGAGTCTCAGGCTGCTGCTTCTTCAAATGGACAGATTTTTTCTAAAGAGGAAGAGAATGTTAGAGATACAGAAGTACCTTTGGCGAAGAGCCACAGCCAATTATTTCAAAACCGAGGAAAAGAAGCTGCTTCTACTGATGCGGTTACGAAAGTGGAGCAACAAACTGATGTATTTCCTGTTAAGTCAGACCAAGGAGCAGAGGCTAGTACTCAAAAGACTCCTAGAAGTGATTCTAATGCTGATAAGGGAAAAGCTGTTGCATCTGACGGAGACCAATCTAATGTTCCGTCAGAAGAAAACACTCCCCAGCAGCCCAAGGATACAGCCTCTGCCAGGAAATATCATGGACCGTTGTTTGATTTTCCCTTTTTCACTCGGAAACATGACTCTTATGGGTCTGCAACAGCCAATGCTAATAACAATCTCACATTAGCATATGATATTAAAGATCTGATTAGTGAAGAAGGTGCGGAGTTTTTTAATAAAAAAAGAACAGACAGTTTGAAGAAGATAAATGGTCTACTAGCAAAAAATTTGGAAAGGAAAAGGATTAGGCCTGATCTTGTTTTGCGGCTTCAAATTGAAGAGAAAAAGCTTAGGCTAAGGGATCTTCAGGCTCGTGTTAGAGATGAAGTGGATCGACAACAACAGGAGATAATGTCCATGCCTGATAGGCCATACCGTAAATTTGTGAGGTTGTGTGAGCGCCAACGCCTTGAAATGAATAGACAAGTACTGGCCAGCCAGAAAGCTGTTAGAGAGAAGCAGCTGAAAACCATTTTTCAGTGGCGTAAGAAACTCCTTGAGGCTCACTGGGCTATACGTGATGCACGCACTGCTCGTAACAGGGGAGTGGCCAAATACCATGAAAAGATGTTGAGAGAGTTCTCGAAGAGAAAAGATGATGGCCGGAACAAAAGGATGGAGGCCTTGAAAAACAATGATGTAGAAAGGTACAGGGAGATGTTGCTGGAACAGCAAACAAATATACCTGGTGATGCTGCTGAAAGATATGCTGTTCTCTCTTCATTTTTGACCCAAACCGAAGATTATCTCCATAAACTTGGAGGTAAGATTACTGCCACCAAGAATCAACAGGAAGTGGAGGAGGCAGCGAATGCTGCAGCAATTGCAGCGAGGTTGCAGGGCCTGTCAGAAGAAGAGGTCAGGGCAGCAGCTGCTTGTGCTCGGGAAGAAGTTGTGATCAGAAATAGATTTACGGAAATGAATGCGCCAAAAGATAATTCATCTGTCAACAAGTATTATACTCTGGCTCATGCTGTAAACGAAGTGGTTGTGAGACAACCCTCAATGCTTCAAGCTGGAACTTTACGTGATTACCAGCTGGTTGGATTGCAATGGATGCTCTCGTTGTATAATAACAAATTAAATGGGATCTTGGCTGATGAGATGGGTCTTGGAAAAACTGTGCAGGTAATGGCACTGATTGCTTACCTTATGGAGTTTAAGGGGAATTATGGACCACATCTCATCATCGTTCCCAATGCTGTTCTAGTGAACTGGAAGAGTGAACTCCATACTTGGCTGCCATCTGTTTCATGCATATATTATGTTGGTACAAAGGATCAACGTTCAAAATTGTTCGCTCAGGAGGTTTGCGCCATGAAGTTCAATGTCCTCGTTACAACTTATGAGTTCATTATGTATGATCGATCAAAACTCTCAAAAGTTGATTGGAAGTATATTATAATTGATGAGGCACAACGGATGAAGGACAGAGAGTCTGTTTTGGCCCGAGATCTTGACCGGTACCGTTGCCAACGAAGATTACTTCTCACTGGGACACCTTTACAGAACGATCTGAAAGAGCTGTGGTCATTATTGAATCTCCTCCTTCCTGATGTCTTTGACAATCGAAAAGCATTTCATGATTGGTTCGCACAACCCTTTCAAAAAGAAGGTCCTGCGCATAATATAGAGGATGACTGGCTGGAAACTGAGAAAAAGGTCATTGTCATTCATAGGCTTCATCAAATTTTAGAGCCGTTCATGCTTAGACGTCGTGTTGAGGATGTTGAAGGTTCACTTCCCCCTAAGGTTTCGGTAGTCTTAAGATGTAGAATGTCTGCTATACAGAGTGCCGTTTATGATTGGATTAAAGCTACGGGAACTCTAAGAGTTGATCCAGACGATGAAAAACTTAGGGCTCAGAAGAGTTCGATCTACCAAGCCAAGATATACAGAACTTTAAATAATAGGTGCATGGAGTTGAGGAAAACATGTAACCATCCTTTGCTCAATTATCCATATTTCAATGATCTTTCCAAGGATTTTCTCGTGAGGTCATGTGGAAAACTGTGGATTCTGGATAGAATTCTTATAAAGCTACAGAGGACAGGCCATCGGGTGTTGCTCTTCAGTACGATGACAAAACTCCTTGATATTTTAGAAGAGTATTTGCAATGGAGGAGGCTTGTATACAGAAGAATAGATGGGACTACCAGCCTAGAAGATCGGGAGTCAGCTATTGTGGATTTCAATGATCCTGATACTGATTGTTTTATATTCCTGCTTAGTATACGTGCAGCTGGAAGGGGTCTCAACCTTCAGACTGCTGACACAGTTGTGATATATGATCCGGATCCGAACCCCAAGAATGAGGAACAAGCAGTTGCCAGAGCCCATCGTATTGGGCAGACAAGGGAAGTAAAAGTAATTTATATGGAGGCAGTTGTTGAAAAGTTTTCCAGCCATCAAAAGGAGGACGAGCTTAGAAGTGGTGGTTCAATAGACCTAGAGGATGACTTGGCTGGGAAGGACCGGTATATAGGATCTATTGAGGGTCTCATAAGGAATAATATTCAGCAGTACAAGATCGACATGGCTGATGAAGTCATTAATGCTGGGCGTTTTGACCAAAGGACGACTCATGAAGAGCGGCGTATGACTTTGGAGACTTTATTGCATGATGAAGAGAGATATCAAGAAACCGTCCATGATGTACCTTCTCTCCATGAGGTGAACAGGATGATTGCCAGAAGCGAGGAGGAAGTTGAGTTATTTGATCAAATGGATGAAGAGTTTGACTGGACCGAGGAGATGACTTCTCACGAGCAGGTGCCTGAGTGGCTTCGAGCTAGTACCAGAGAGGTGAATACTACCGTTGCTGATTTGTCTAAGAAACCGTCAAAGAACATGTTATCAAGCAATAATCTGATCGTGCAAACTACTGGGCCTGGAGGTGAGAGAAAAAGGGGGCGGCCAAAGAGCAAAAAGATTAACTACAAGGAAATTGAAGATGACAATGGAGGATTCTCAGAGGATAGCTCTGAGGAAAGGAACATTGATTCTGGGAATGAAGAAGAGGGAGACATTCAACAATTTGATGATGATGAGCTAACTGGTCCTCTTGGTAATCACCAAACCAACAAAGACGAATCTGATGGAGAGAACCCTGTCCGCGGTTATGATTATCCTCCTCGGTCTGGTTGTTTTAAAAAAAATACTCCACGGGATGATGCCGTTTCTTCAGGATCTTCGCCAGAAAGTCATAGATCGAAAGCGATGGCTTCTCCGGTTTCTTCACGAAAGTTTGGCTCTTTGTCTGCATTGGAAACTAGGCCAGGTTCTGTCTCAAAAAGAATGGTGGATGATACAGAAGATGGGGAAATAGCAGCATCGGGGGATTCTCACATAGATCTCCAACGATCAGGAAGTTGGGCCCATGAACGTGATGAAGGAGAAGAACAGGTTTTGCAACCTACAATAAAGCGCAAACGGAGTATTCGTGTAAGACCCCGTCAAACAGCAGAAAGAATAGACGGTATTGATATGCCTGCATCTCAGCCATTGCAAGTCGATCGTAGCTATCGATCAAAATTGAGGACAGTTGTTGACTCACATGGTTCAAGACAAGAACAGAGTGATTCATCCTCGAGACTTAGGAGTTTACCTGCAAAGAAAGTAGCTAATACTTCCAAGCTGCATGTATCATCACCAAATTCTGGTAGATTGAATGCCACCCAGGAGGACAACACTGAAGCTGCTAGAGAAACATGGGATGGAACTAGTCCTATTGGCTCTTCAAGTGCAGGTGCAAGAATGTCCCACAACATACAGAAACGGTGCAAAACGGTAATTAGCAAACTCCAAAGGAGAATCGACAAGGAAGGTCAGCAGATTGTGCCTATGCTGACAAATTTGTGGAAGAGAATTCAGACTGGGTATGCAGCTGGAGGTGTAAATAATCTATTGGAACTGCGAGAGATTGATCACCGGTTAGAAAGGCTAGAGTACGCAGGGGTTATGGAACTCGCATCTGACGTGCAGTATATGCTAAGGGGAGCAATGCAATTCTATGGATTCTCACACGAGGTGAGATCTGAAGCAAAGAAGGTTCACAATCTGTTCTTTGATCTGCTGAAGATGTCTTTTCCGGACACAGATTTCCGAGAAGCAAGGAATGCTCTTTCCTTCTCTGGTCCAACCCCGACTTTGGTATCCACACTATCCCCGAGAGCAGCAGGTACTAGTCAGGGTAAGAAGCAAAAGCATGTATATGAGAAGGAACCGGAGCCAAGCTCTCCTCAGAGACCTCAACAACGAGAGAATTCAAGGATCAGAGTACAGATACCTCAGAAAGAAACAAAGCTCGGCGGGACATCAAGCCACACCGATGACTCTCCAATTTTAACTCATCCAGGGGAACTAGTAATCTGCAAGAAGAAGAGGAAAGACAGAGAAAAGTCTGCGCCAAGAACAAGAACCGCTGGCTCAAGCAGCCCGGTCTCACCTCCAGCTATGGTAGGTCGTGGTCTTAGAAGTCCTGTGTCTGGTTCAGGTACAAGGGAGACAAGGCTAGCTCAGCAGCAACGATGGCCAAACCAAAGCACACATCCAAACAACAGCGGTACGGCTGGTGATTCAGTGGGATGGGCTAATCCGGTGAAGAGGTTAAGAACCGATGCTGGTAAAAGAAGGCCGAGCCATTTGTAA

Protein:   MQSGGSGGGGPSRNPGMGPGGRTNSTSSAASPSSSSSSVQQQLASRQQQQQQQLRNNTEGNDGMFAYHAGGGQGMMGGGSFGSSSGFMQQPQKPRMFFESPQQQHNSSQEGQQSFNPMQQAYIQFALQAQQQKAQQQARMGMMGPSTVGKKDQDARMGVLNMQDMMMMPTMQASHQAQASSSKPPGEQFAHGERKMESGPQQRNETKPHPQQVGTGQLMPGNINRQMQAPQAMQGVNNMGTNQLAFSQQWQAMQAWARERNIDLSHPANASQMAHILQSRMSAQQKAIEGNVASQSPSLPVSSQPVSSSAVPGENSPRANSASDISGQSGPAKARHANSFASTSSPRTVNPAASPFSQGRDNPMYPRHLVQSTNGMHSGNSLQTSANEAHVLDQKKSLGSSEHLQMQQPRQPNAPTPNLAAPSDTAPLSNSSRQSGQGTQQAQKRSGFTKQQLHVLKAQILAFRRLKKGEGSLPQELLQAIAPPPLELQTQRQISPVRLQVQDRSSDKTVEDQARSLESGRESQAAASSNGQIFSKEEENVRDTEVPLAKSHSQLFQNRGKEAASTDAVTKVEQQTDVFPVKSDQGAEASTQKTPRSDSNADKGKAVASDGDQSNVPSEENTPQQPKDTASARKYHGPLFDFPFFTRKHDSYGSATANANNNLTLAYDIKDLISEEGAEFFNKKRTDSLKKINGLLAKNLERKRIRPDLVLRLQIEEKKLRLRDLQARVRDEVDRQQQEIMSMPDRPYRKFVRLCERQRLEMNRQVLASQKAVREKQLKTIFQWRKKLLEAHWAIRDARTARNRGVAKYHEKMLREFSKRKDDGRNKRMEALKNNDVERYREMLLEQQTNIPGDAAERYAVLSSFLTQTEDYLHKLGGKITATKNQQEVEEAANAAAIAARLQGLSEEEVRAAAACAREEVVIRNRFTEMNAPKDNSSVNKYYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFAQEVCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPPKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKSSIYQAKIYRTLNNRCMELRKTCNHPLLNYPYFNDLSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVEKFSSHQKEDELRSGGSIDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEEFDWTEEMTSHEQVPEWLRASTREVNTTVADLSKKPSKNMLSSNNLIVQTTGPGGERKRGRPKSKKINYKEIEDDNGGFSEDSSEERNIDSGNEEEGDIQQFDDDELTGPLGNHQTNKDESDGENPVRGYDYPPRSGCFKKNTPRDDAVSSGSSPESHRSKAMASPVSSRKFGSLSALETRPGSVSKRMVDDTEDGEIAASGDSHIDLQRSGSWAHERDEGEEQVLQPTIKRKRSIRVRPRQTAERIDGIDMPASQPLQVDRSYRSKLRTVVDSHGSRQEQSDSSSRLRSLPAKKVANTSKLHVSSPNSGRLNATQEDNTEAARETWDGTSPIGSSSAGARMSHNIQKRCKTVISKLQRRIDKEGQQIVPMLTNLWKRIQTGYAAGGVNNLLELREIDHRLERLEYAGVMELASDVQYMLRGAMQFYGFSHEVRSEAKKVHNLFFDLLKMSFPDTDFREARNALSFSGPTPTLVSTLSPRAAGTSQGKKQKHVYEKEPEPSSPQRPQQRENSRIRVQIPQKETKLGGTSSHTDDSPILTHPGELVICKKKRKDREKSAPRTRTAGSSSPVSPPAMVGRGLRSPVSGSGTRETRLAQQQRWPNQSTHPNNSGTAGDSVGWANPVKRLRTDAGKRRPSHL